Judith K Brown

PMID: 18256781;Abstract:

Geminivirus taxonomy and nomenclature is growing in complexity with the number of genomic sequences deposited in sequence databases. Taxonomic and nomenclatural updates are published at regular intervals (Fauquet et al. in Arch Virol 145:1743-1761, 2000, Arch Virol 148:405-421, 2003). A system to standardize virus names, and corresponding guidelines, has been proposed (Fauquet et al. in Arch Virol 145:1743-1761, 2000). This system is now followed by a large number of geminivirologists in the world, making geminivirus nomenclature more transparent and useful. In 2003, due to difficulties inherent in species identification, the ICTV Geminiviridae Study Group proposed new species demarcation criteria, the most important of which being an 89% nucleotide (nt) identity threshold between full-length DNA-A component nucleotide sequences for begomovirus species. This threshold has been utilised since with general satisfaction. More recently, an article has been published to clarify the terminology used to describe virus entities below the species level [5]. The present publication is proposing demarcation criteria and guidelines to classify and name geminiviruses below the species level. Using the Clustal V algorithm (DNAStar MegAlign software), the distribution of pairwise sequence comparisons, for pairs of sequences below the species taxonomic level, identified two peaks: one at 85-94% nt identity that is proposed to correspond to "strain" comparisons and one at 92-100% identity that corresponds to "variant" comparisons. Guidelines for descriptors for each of these levels are proposed to standardize nomenclature under the species level. In this publication we review the status of geminivirus species and strain demarcation as well as providing updated isolate descriptors for a total of 672 begomovirus isolates. As a consequence, we have revised the status of some virus isolates to classify them as "strains", whereas several others previously classified as "strains" have been upgraded to "species". In all other respects, the classification system has remained robust, and we therefore propose to continue using it. An updated list of all geminivirus isolates and a phylogenetic tree with one representative isolate per species are provided. © 2008 Springer-Verlag.

Abstract:

The non «B» biotype of Bemisia tabaci (Gennadius) is recorded for the first time in Crete in 1992, in the north east and south east of the island. Trialeurodes vaporariorum (Westwood) is the predominant whitefly on plants in the north and west of the island. Three surveys of Crete were made in 1992 and 1993 for natural enemies of B. tabaci and T. vaporariorum and resulted in the collection of 4 species of Encarsia, (plus a number of species that are unidentifiable at this time), an Eretmocerus sp. (unidentifiable at this time) and a fungal pathogen, Paecilomyces farinosus (Dickson Ex Fries) Brown & Smith. Encarsia adrianae was identified from T. vaporariorum; which constitutes its most westerly distribution point and a new host record respectively. B. tabaci and T. vaporariorum were found on horticultural crops, ornamentals and weeds. Populations of both whitefly species were severely depleted on field hosts throughout the island during the winter of 1992/93. Climatic constraints, competition with T. vaporariorum in otherwise suitable niches, effective natural enemies and an observed low level of polyphagy may explain the present limited distribution of the non «B» biotype of B. tabaci in Crete. © 1993 Lavoisier Abonnements.

Alabi, O.J., Al Rwahnih, M., Brown, J.K., Idris, A.M., Gregg, L., Kmieciak, E., Sétamou, M., and Jifon, J.L. 2016. First report of papaya naturally-infected with the introduced Tomato yellow leaf curl virus-IL. Plant Dis. 100:1959. http://dx.doi.org/10.1094/PDIS-04-16-0469-PDN.

Abstract:

Bemisia tabaci (Gennadius) transmits plant viruses of the genus Begomovirus in a circulative manner, and once acquired, virus particles persist and are transmissible for the life of the vector. Saliva is generated by primary and accessory salivary gland cells of the paired, bilaterally symmetrical salivary gland system. It travels from secretory cells, through the internal ductules, to the external ducts, which in turn carry it to the oral region where the so-called salivary pump and the stylets occur. The ducts of either side consist of at least four componentstwo gland ducts, one lateral duct, and one postmedial duct. Gland ducts start, respectively, at the hilum of each gland, and extend independently of each other before fusing together by their basal laminae to become the biluminal lateral duct. The biluminal lateral duct merges into the uniluminal postmedial duct. The lateral and postmedial ducts make intimate contact with muscles in its area, including one involved in governing the retractable labial shaft. The labium consists of external and internal halves. During retraction/protraction, the latter half moves through the second intercommissural space. The postmedial ducts track anteriorly around either side of it, and fuse together at the body's midline to form the biluminal medial duct. This duct drains into the salivary pump. The retortiform organs are involved in stylet regeneration. Maxillary stylets have grooves and ridges that interlock to form the salivary and food canals. In developmental terms, the salivary canal results from failure of one ridge to fill its corresponding groove. © 2012 Entomological Society of America.